Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADH61174.1Sporulation protein, YlmC/YmxH family; KEGG: tpd:Teth39_0823 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein. (83 aa)    
Predicted Functional Partners:
ADH61175.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.925
ADH61176.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.899
ADH61177.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
 
     0.891
ADH61798.1
KEGG: tex:Teth514_0606 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
 
     0.829
ADH60887.1
KEGG: tpd:Teth39_1124 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
  
    0.800
ADH60943.1
Sporulation protein, YlmC/YmxH family; KEGG: tpd:Teth39_1199 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein.
  
   
 0.795
ADH60850.1
KEGG: tex:Teth514_1525 AAA ATPase; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase.
  
    0.774
ADH59982.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: tex:Teth514_0108 regulatory protein, DeoR.
  
    0.773
ADH60853.1
KEGG: tpd:Teth39_1091 hypothetical protein; TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD.
  
     0.772
ADH61055.1
Sporulation integral membrane protein YlbJ; KEGG: tpd:Teth39_1298 nucleoside recognition domain-containing protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein.
  
     0.772
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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