Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADH61364.1PFAM: periplasmic binding protein; KEGG: tpd:Teth39_0647 periplasmic binding protein. (380 aa)    
Predicted Functional Partners:
ADH61362.1
KEGG: tpd:Teth39_0649 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.970
ADH61363.1
PFAM: transport system permease protein; KEGG: tpd:Teth39_0648 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.964
ADH60183.1
PFAM: transport system permease protein; KEGG: tex:Teth514_0297 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.914
ADH60184.1
KEGG: tpd:Teth39_1902 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.880
ADH60169.1
KEGG: tpd:Teth39_1925 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
    
 0.775
ADH60168.1
PFAM: ABC-3 protein; KEGG: tex:Teth514_0276 ABC-3 protein.
    
 0.743
ADH61145.1
KEGG: tpd:Teth39_0873 hypothetical protein.
  
 0.684
ADH61361.1
PFAM: protein of unknown function UPF0066; KEGG: tpd:Teth39_0650 hypothetical protein.
 
     0.627
ADH60332.1
KEGG: tpd:Teth39_1764 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
     
 0.622
ADH60053.1
KEGG: bcl:ABC3122 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
     
 0.603
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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