Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH61483.1Delta-lactam-biosynthetic de-N-acetylase; KEGG: tpd:Teth39_0532 polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase. (293 aa)    
Predicted Functional Partners:
ADH60581.1
KEGG: tpd:Teth39_1477 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II.
 
      0.899
ADH61484.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
       0.577
ADH61485.1
KEGG: tpd:Teth39_0530 hypothetical protein.
       0.577
ADH60904.1
TIGRFAM: spore coat assembly protein SafA; PFAM: Peptidoglycan-binding lysin domain; KEGG: tte:TTE1337 LysM repeat-containing protein; SMART: Peptidoglycan-binding LysM.
 
      0.545
ADH61576.1
KEGG: tpd:Teth39_0446 peptidoglycan binding domain-containing protein; PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
    
 0.528
ADH61486.1
PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: tex:Teth514_1013 nucleotidyl transferase.
     
 0.442
ADH61482.1
PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: tpd:Teth39_0534 glycerol-3-phosphate responsive antiterminator, GlpP.
       0.407
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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