STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH61570.1PFAM: YbbR family protein; KEGG: tpd:Teth39_0458 YbbR family protein. (396 aa)    
Predicted Functional Partners:
dacA
Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
 
  
 0.985
ADH61572.1
PFAM: transport-associated; KEGG: amt:Amet_4314 transport-associated protein.
       0.577
ADH61891.1
KEGG: tpd:Teth39_0100 primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region.
 
     0.515
ADH61892.1
KEGG: tpd:Teth39_0099 DNA replication protein DnaC; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
     0.515
buk-2
KEGG: tpd:Teth39_0459 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family.
       0.503
ADH60302.1
PFAM: Spore germination protein-like Gmad2, bacteria; Lipoprotein LpqB, GerMN domain; KEGG: tpd:Teth39_1794 hypothetical protein.
  
     0.501
ADH61568.1
KEGG: tpd:Teth39_0460 phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase.
  
    0.491
ADH61924.1
Phosphoesterase RecJ domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
  
 0.476
ADH61530.1
KEGG: tpd:Teth39_0486 outer membrane lipoprotein-sorting protein-like protein.
 
     0.444
ADH61239.1
PFAM: major facilitator superfamily MFS_1; KEGG: tex:Teth514_2056 major facilitator transporter.
  
     0.437
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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