Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH61582.1KEGG: tpd:Teth39_0440 hypothetical protein. (220 aa)    
Predicted Functional Partners:
ADH61580.1
PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: tpd:Teth39_0442 MazG nucleotide pyrophosphohydrolase.
 
     0.588
ADH59902.1
D-alanine--D-alanine ligase; Manually curated; KEGG: tpd:Teth39_2176 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein.
  
     0.555
ADH61581.1
Thymidylate synthase complementing protein ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
       0.542
ADH61904.1
KEGG: hbu:Hbut_0225 hypothetical protein.
  
     0.535
ADH60500.1
PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: tpd:Teth39_1589 positive regulator of sigma E, RseC/MucC.
  
     0.518
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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