Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH61633.1PFAM: PGAP1 family protein; KEGG: tex:Teth514_0840 PGAP1 family protein. (414 aa)    
Predicted Functional Partners:
ispF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.786
ADH59944.1
KEGG: tpd:Teth39_2133 hypothetical protein.
  
    0.775
ADH61207.1
KEGG: tex:Teth514_2039 hypothetical protein.
  
     0.771
ADH61202.1
KEGG: tpd:Teth39_0795 hypothetical protein.
  
     0.768
ADH61196.1
KEGG: tte:TTE1657 hypothetical protein; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like.
  
     0.732
ADH61881.1
KEGG: tex:Teth514_2341 hypothetical protein.
  
     0.731
ADH61530.1
KEGG: tpd:Teth39_0486 outer membrane lipoprotein-sorting protein-like protein.
  
    0.724
ADH60997.1
Putative sensor with HAMP domain; KEGG: tpd:Teth39_1253 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; SMART: histidine kinase HAMP region domain protein.
  
     0.719
ADH61826.1
PFAM: Abortive infection protein; KEGG: tex:Teth514_0581 abortive infection protein.
  
     0.719
ADH60780.1
KEGG: tpd:Teth39_1011 hypothetical protein.
  
     0.713
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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