Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADH61657.1PFAM: protein of unknown function DUF1614; KEGG: tex:Teth514_0817 hypothetical protein. (212 aa)    
Predicted Functional Partners:
ADH61282.1
PFAM: iron dependent repressor; KEGG: tpd:Teth39_0719 iron dependent repressor.
  
     0.533
ADH61656.1
PFAM: protein of unknown function DUF896; KEGG: tpd:Teth39_0326 hypothetical protein.
       0.525
ADH61655.1
Acetylornithine transaminase; KEGG: tpd:Teth39_0327 aminotransferase class-III; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.491
ADH61654.1
KEGG: tex:Teth514_0820 hypothetical protein.
       0.473
ADH60479.1
PFAM: DNA polymerase beta domain protein region; KEGG: tpd:Teth39_1612 DNA polymerase beta subunit.
 
     0.406
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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