Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH61667.1Radical SAM domain protein; KEGG: tte:TTE2753 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (453 aa)    
Predicted Functional Partners:
ADH61666.1
PFAM: major facilitator superfamily MFS_1; KEGG: tte:TTE2245 major facilitator superfamily permease.
 
     0.852
ADH60790.1
Manually curated; KEGG: tpd:Teth39_1020 hypothetical protein.
 
 
   0.701
ADH60220.1
PFAM: Radical SAM domain protein; KEGG: kol:Kole_0769 radical SAM domain protein.
  
     0.563
ADH61668.1
Hypothetical protein.
       0.511
ADH61659.1
KEGG: tte:TTE2353 ABC-type multidrug/protein/lipid transport system, ATPase component; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     0.408
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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