Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH61682.1KEGG: tex:Teth514_0807 hypothetical protein. (302 aa)    
Predicted Functional Partners:
ADH61681.1
PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: tpd:Teth39_0316 shikimate/quinate 5-dehydrogenase.
     0.995
ADH61683.1
KEGG: tpd:Teth39_0314 hypothetical protein.
 
     0.958
ADH61803.1
KEGG: tpd:Teth39_0178 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein.
 
     0.789
ADH61166.1
PFAM: protein of unknown function DUF1614; KEGG: tpd:Teth39_0832 hypothetical protein.
  
     0.724
ADH61165.1
KEGG: tpd:Teth39_0833 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.633
ADH61655.1
Acetylornithine transaminase; KEGG: tpd:Teth39_0327 aminotransferase class-III; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.632
greA
GreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.608
ADH60959.1
PFAM: glycosyl transferase family 2; KEGG: tpd:Teth39_1215 glycosyl transferase family protein.
  
     0.591
lysS
KEGG: tpd:Teth39_0318 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.589
ADH61684.1
KEGG: tpd:Teth39_0313 hypothetical protein.
       0.508
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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