Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH61796.1Germination protein YpeB; KEGG: tpd:Teth39_0185 peptidase; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4. (444 aa)    
Predicted Functional Partners:
ADH61797.1
Spore cortex-lytic enzyme; KEGG: tpd:Teth39_0184 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein.
 
  
 0.983
ADH61799.1
KEGG: tpd:Teth39_0182 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
   
 0.862
ADH61800.1
KEGG: tpd:Teth39_0181 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
   
 0.829
ADH61801.1
PFAM: GerA spore germination protein; KEGG: tpd:Teth39_0180 GerA spore germination protein.
 
    0.796
ADH61795.1
KEGG: tpd:Teth39_0186 hypothetical protein.
 
   
 0.778
ADH60547.1
KEGG: tpd:Teth39_1508 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
  
 0.774
ADH61798.1
KEGG: tex:Teth514_0606 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
 
   
 0.774
ADH61685.1
KEGG: tpd:Teth39_0312 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
   
 0.755
ADH60880.1
KEGG: tex:Teth514_1554 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
   
 0.699
ADH61177.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.688
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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