Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADH61806.1KEGG: tex:Teth514_0598 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (508 aa)    
Predicted Functional Partners:
ADH59944.1
KEGG: tpd:Teth39_2133 hypothetical protein.
 
 
 
 0.815
ADH61798.1
KEGG: tex:Teth514_0606 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
 
     0.805
ADH60856.1
TIGRFAM: stage III sporulation protein AG; KEGG: tpd:Teth39_1094 hypothetical protein.
  
    0.786
ADH60857.1
KEGG: tex:Teth514_1532 hypothetical protein.
  
  
 0.782
ADH60549.1
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tex:Teth514_2188 single-stranded DNA-binding protein.
  
     0.754
ADH60694.1
Sporulation protein YqfD; KEGG: tpd:Teth39_1370 putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD.
  
     0.748
ADH60780.1
KEGG: tpd:Teth39_1011 hypothetical protein.
 
     0.746
ADH60663.1
KEGG: tpd:Teth39_1401 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.718
ADH60530.1
Manually curated; KEGG: tpd:Teth39_1525 hypothetical protein.
  
     0.700
ADH61800.1
KEGG: tpd:Teth39_0181 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
     0.699
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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