STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH61824.1PFAM: DNA polymerase beta domain protein region; KEGG: amt:Amet_0755 DNA polymerase beta subunit. (112 aa)    
Predicted Functional Partners:
ADH61823.1
KEGG: swo:Swol_0500 hypothetical protein.
       0.773
ADH61825.1
Transcriptional regulator, LacI family; KEGG: tex:Teth514_0582 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.592
ADH61822.1
PFAM: HEPN domain protein; KEGG: csc:Csac_0790 HEPN domain-containing protein.
       0.526
ADH61826.1
PFAM: Abortive infection protein; KEGG: tex:Teth514_0581 abortive infection protein.
       0.412
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.