Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADH61835.1KEGG: tte:TTE2409 hypothetical protein. (528 aa)    
Predicted Functional Partners:
ADH61525.1
KEGG: tte:TTE2165 hypothetical protein.
  
     0.620
ADH61836.1
PFAM: polysaccharide deacetylase; S-layer domain protein; KEGG: tte:TTE2603 xylanase/chitin deacetylase.
       0.446
ADH61834.1
PFAM: S-layer domain protein; KEGG: pjd:Pjdr2_5781 S-layer domain protein.
       0.438
ADH60290.1
PFAM: glucose-inhibited division protein A; KEGG: tte:TTE2589 hypothetical protein.
 
     0.403
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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