Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADH61904.1KEGG: hbu:Hbut_0225 hypothetical protein. (231 aa)    
Predicted Functional Partners:
ADH61903.1
PFAM: sodium:neurotransmitter symporter; KEGG: fno:Fnod_1580 sodium:neurotransmitter symporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.853
ADH59878.1
KEGG: csc:Csac_2638 PKD domain-containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein.
  
     0.602
ADH60500.1
PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: tpd:Teth39_1589 positive regulator of sigma E, RseC/MucC.
  
     0.588
ADH59851.1
KEGG: cac:CAC1978 hypothetical protein; manually curated; PFAM: Type II secretion system F domain.
  
     0.587
ADH61573.1
PFAM: UspA domain protein; KEGG: tpd:Teth39_0454 osmosensitive K+ channel histidine kinase-like protein.
  
     0.566
ADH61582.1
KEGG: tpd:Teth39_0440 hypothetical protein.
  
     0.535
ADH59902.1
D-alanine--D-alanine ligase; Manually curated; KEGG: tpd:Teth39_2176 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein.
  
     0.505
ADH61720.1
KEGG: csc:Csac_2638 PKD domain-containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein.
  
     0.491
ADH61702.1
KEGG: tpd:Teth39_0292 hypothetical protein.
  
     0.488
ADH61902.1
Hypothetical protein.
       0.480
Your Current Organism:
Thermoanaerobacter mathranii
NCBI taxonomy Id: 583358
Other names: T. mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii A3, Thermoanaerobacter mathranii subsp. mathranii DSM 11426, Thermoanaerobacter mathranii subsp. mathranii str. A3, Thermoanaerobacter mathranii subsp. mathranii strain A3
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