STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720995_00349Unannotated protein. (356 aa)    
Predicted Functional Partners:
GCA_000720995_00350
Unannotated protein.
 
     0.938
GCA_000720995_00351
Unannotated protein.
       0.793
GCA_000720995_00348
Unannotated protein.
       0.735
GCA_000720995_00220
Unannotated protein.
  
 
  0.668
GCA_000720995_03118
Unannotated protein.
  
 
  0.668
GCA_000720995_06881
Unannotated protein.
  
 
  0.668
GCA_000720995_01939
Unannotated protein.
   
 
  0.660
GCA_000720995_02169
Unannotated protein.
   
 
  0.660
GCA_000720995_00963
Unannotated protein.
 
     0.617
GCA_000720995_03914
Unannotated protein.
  
   0.505
Your Current Organism:
Streptomyces celluloflavus
NCBI taxonomy Id: 58344
Other names: ATCC 29806, CECT 3242, DSM 40839, IFO 13780, JCM 4126, KCTC 9702, NBRC 13780, NRRL B-2493, S. celluloflavus, Streptomyces cellulosiflavus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.