STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrB_1Organic hydroperoxide resistance protein OhrB. (136 aa)    
Predicted Functional Partners:
ohrR_1
Organic hydroperoxide resistance transcriptional regulator.
 
  
 0.847
dps_1
DNA protection during starvation protein; Belongs to the Dps family.
  
  
 0.546
dps_2
DNA protection during starvation protein; Belongs to the Dps family.
  
  
 0.546
otsA
Trehalose-phosphate synthase.
   
    0.473
OSY47089.1
CsbD-like protein.
   
  
 0.433
OSY46432.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
   
  
 0.433
OSY46495.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
   
  
 0.433
OSY47960.1
Putative oxidoreductase/MSMEI_2347.
  
  
 0.406
OSY47084.1
Putative oxidoreductase/MSMEI_2347.
  
  
 0.406
rsbU_14
Phosphoserine phosphatase RsbU.
   
    0.403
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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