STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY48433.1Hypothetical protein. (346 aa)    
Predicted Functional Partners:
cysG
Siroheme synthase.
  
 
 0.983
nasF
Uroporphyrinogen-III C-methyltransferase.
  
 
 0.885
OSY48431.1
Scramblase.
       0.884
OSY48432.1
BadF/BadG/BcrA/BcrD ATPase family protein.
       0.884
ung_1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.854
cobJ
Precorrin-3B C(17)-methyltransferase.
    
 0.819
cobL_2
Precorrin-6Y C(5,15)-methyltransferase [decarboxylating].
 
  
 0.816
OSY36505.1
Cobalamin biosynthesis protein CbiG.
    
 0.815
cobL_1
Precorrin-6Y C(5,15)-methyltransferase [decarboxylating].
    
 0.788
OSY36066.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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