Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acrA | eryA_4 | BG653_05776 | BG653_01551 | Acryloyl-CoA reductase electron transfer subunit beta. | Erythronolide synthase, modules 3 and 4. | 0.697 |
acrA | etfB | BG653_05776 | BG653_05777 | Acryloyl-CoA reductase electron transfer subunit beta. | Electron transfer flavoprotein subunit beta. | 0.999 |
acrA | fadJ_1 | BG653_05776 | BG653_00530 | Acryloyl-CoA reductase electron transfer subunit beta. | Fatty acid oxidation complex subunit alpha. | 0.828 |
acrA | fadJ_2 | BG653_05776 | BG653_06214 | Acryloyl-CoA reductase electron transfer subunit beta. | Fatty acid oxidation complex subunit alpha. | 0.828 |
acrA | lgrB_1 | BG653_05776 | BG653_04961 | Acryloyl-CoA reductase electron transfer subunit beta. | Linear gramicidin synthase subunit B; Overlaps another CDS with the same product name. | 0.700 |
acrA | mmgB | BG653_05776 | BG653_00949 | Acryloyl-CoA reductase electron transfer subunit beta. | Putative 3-hydroxybutyryl-CoA dehydrogenase. | 0.518 |
acrA | mmgC_1 | BG653_05776 | BG653_00464 | Acryloyl-CoA reductase electron transfer subunit beta. | Acyl-CoA dehydrogenase. | 0.936 |
acrA | mmgC_11 | BG653_05776 | BG653_04036 | Acryloyl-CoA reductase electron transfer subunit beta. | Acyl-CoA dehydrogenase. | 0.902 |
acrA | pks2_2 | BG653_05776 | BG653_05920 | Acryloyl-CoA reductase electron transfer subunit beta. | Phthioceranic/hydroxyphthioceranic acid synthase. | 0.677 |
eryA_4 | acrA | BG653_01551 | BG653_05776 | Erythronolide synthase, modules 3 and 4. | Acryloyl-CoA reductase electron transfer subunit beta. | 0.697 |
eryA_4 | etfB | BG653_01551 | BG653_05777 | Erythronolide synthase, modules 3 and 4. | Electron transfer flavoprotein subunit beta. | 0.589 |
eryA_4 | fadJ_1 | BG653_01551 | BG653_00530 | Erythronolide synthase, modules 3 and 4. | Fatty acid oxidation complex subunit alpha. | 0.926 |
eryA_4 | fadJ_2 | BG653_01551 | BG653_06214 | Erythronolide synthase, modules 3 and 4. | Fatty acid oxidation complex subunit alpha. | 0.926 |
eryA_4 | lgrB_1 | BG653_01551 | BG653_04961 | Erythronolide synthase, modules 3 and 4. | Linear gramicidin synthase subunit B; Overlaps another CDS with the same product name. | 0.999 |
eryA_4 | mmgB | BG653_01551 | BG653_00949 | Erythronolide synthase, modules 3 and 4. | Putative 3-hydroxybutyryl-CoA dehydrogenase. | 0.490 |
eryA_4 | mmgC_1 | BG653_01551 | BG653_00464 | Erythronolide synthase, modules 3 and 4. | Acyl-CoA dehydrogenase. | 0.708 |
eryA_4 | mmgC_11 | BG653_01551 | BG653_04036 | Erythronolide synthase, modules 3 and 4. | Acyl-CoA dehydrogenase. | 0.708 |
eryA_4 | pks2_2 | BG653_01551 | BG653_05920 | Erythronolide synthase, modules 3 and 4. | Phthioceranic/hydroxyphthioceranic acid synthase. | 0.999 |
eryA_4 | scpA_1 | BG653_01551 | BG653_00647 | Erythronolide synthase, modules 3 and 4. | Methylmalonyl-CoA mutase. | 0.995 |
etfB | acrA | BG653_05777 | BG653_05776 | Electron transfer flavoprotein subunit beta. | Acryloyl-CoA reductase electron transfer subunit beta. | 0.999 |
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