Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY45506.1 | aam_1 | BG653_03041 | BG653_00538 | Cobalt-containing nitrile hydratase subunit alpha. | Acylamidase; Belongs to the amidase family. | 0.887 |
OSY45506.1 | gatA_1 | BG653_03041 | BG653_01530 | Cobalt-containing nitrile hydratase subunit alpha. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.638 |
OSY45506.1 | gatA_2 | BG653_03041 | BG653_03325 | Cobalt-containing nitrile hydratase subunit alpha. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.745 |
OSY45506.1 | hpd | BG653_03041 | BG653_03727 | Cobalt-containing nitrile hydratase subunit alpha. | 4-hydroxyphenylpyruvate dioxygenase. | 0.531 |
OSY45506.1 | nhhB | BG653_03041 | BG653_03042 | Cobalt-containing nitrile hydratase subunit alpha. | High-molecular weight cobalt-containing nitrile hydratase subunit beta. | 0.999 |
aam_1 | OSY45506.1 | BG653_00538 | BG653_03041 | Acylamidase; Belongs to the amidase family. | Cobalt-containing nitrile hydratase subunit alpha. | 0.887 |
aam_1 | acyP_2 | BG653_00538 | BG653_03418 | Acylamidase; Belongs to the amidase family. | Acylphosphatase. | 0.735 |
aam_1 | aspS | BG653_00538 | BG653_01845 | Acylamidase; Belongs to the amidase family. | Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.741 |
aam_1 | gatA_1 | BG653_00538 | BG653_01530 | Acylamidase; Belongs to the amidase family. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.795 |
aam_1 | gatA_2 | BG653_00538 | BG653_03325 | Acylamidase; Belongs to the amidase family. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.789 |
aam_1 | gatB | BG653_00538 | BG653_03327 | Acylamidase; Belongs to the amidase family. | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.994 |
aam_1 | gatC | BG653_00538 | BG653_03324 | Acylamidase; Belongs to the amidase family. | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.988 |
aam_1 | gltX | BG653_00538 | BG653_03383 | Acylamidase; Belongs to the amidase family. | Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.870 |
aam_1 | hpd | BG653_00538 | BG653_03727 | Acylamidase; Belongs to the amidase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.738 |
aam_1 | nhhB | BG653_00538 | BG653_03042 | Acylamidase; Belongs to the amidase family. | High-molecular weight cobalt-containing nitrile hydratase subunit beta. | 0.742 |
acyP_2 | aam_1 | BG653_03418 | BG653_00538 | Acylphosphatase. | Acylamidase; Belongs to the amidase family. | 0.735 |
acyP_2 | gatA_1 | BG653_03418 | BG653_01530 | Acylphosphatase. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.526 |
acyP_2 | gatA_2 | BG653_03418 | BG653_03325 | Acylphosphatase. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.641 |
aspS | aam_1 | BG653_01845 | BG653_00538 | Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Acylamidase; Belongs to the amidase family. | 0.741 |
aspS | gatA_1 | BG653_01845 | BG653_01530 | Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.745 |
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