Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY44788.1 | OSY47975.1 | BG653_03811 | BG653_00609 | Hypothetical protein. | Metal-dependent hydrolase. | 0.582 |
OSY44788.1 | adiC_2 | BG653_03811 | BG653_00607 | Hypothetical protein. | Arginine/agmatine antiporter. | 0.578 |
OSY47974.1 | OSY47975.1 | BG653_00608 | BG653_00609 | Membrane protein of unknown function. | Metal-dependent hydrolase. | 0.800 |
OSY47974.1 | adiC_2 | BG653_00608 | BG653_00607 | Membrane protein of unknown function. | Arginine/agmatine antiporter. | 0.642 |
OSY47975.1 | OSY44788.1 | BG653_00609 | BG653_03811 | Metal-dependent hydrolase. | Hypothetical protein. | 0.582 |
OSY47975.1 | OSY47974.1 | BG653_00609 | BG653_00608 | Metal-dependent hydrolase. | Membrane protein of unknown function. | 0.800 |
OSY47975.1 | adiC_2 | BG653_00609 | BG653_00607 | Metal-dependent hydrolase. | Arginine/agmatine antiporter. | 0.689 |
adiC_2 | OSY44788.1 | BG653_00607 | BG653_03811 | Arginine/agmatine antiporter. | Hypothetical protein. | 0.578 |
adiC_2 | OSY47974.1 | BG653_00607 | BG653_00608 | Arginine/agmatine antiporter. | Membrane protein of unknown function. | 0.642 |
adiC_2 | OSY47975.1 | BG653_00607 | BG653_00609 | Arginine/agmatine antiporter. | Metal-dependent hydrolase. | 0.689 |
adiC_2 | aml | BG653_00607 | BG653_03126 | Arginine/agmatine antiporter. | Alpha-amylase precursor. | 0.569 |
adiC_2 | arcA | BG653_00607 | BG653_04469 | Arginine/agmatine antiporter. | Arginine deiminase. | 0.661 |
adiC_2 | glgE1 | BG653_00607 | BG653_01005 | Arginine/agmatine antiporter. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.569 |
adiC_2 | malL_1 | BG653_00607 | BG653_01904 | Arginine/agmatine antiporter. | Oligo-1,6-glucosidase. | 0.569 |
adiC_2 | malL_2 | BG653_00607 | BG653_02216 | Arginine/agmatine antiporter. | Oligo-1,6-glucosidase. | 0.569 |
adiC_2 | mmuM | BG653_00607 | BG653_03151 | Arginine/agmatine antiporter. | Homocysteine S-methyltransferase. | 0.582 |
adiC_2 | treS | BG653_00607 | BG653_01004 | Arginine/agmatine antiporter. | Trehalose synthase/amylase TreS. | 0.569 |
aml | adiC_2 | BG653_03126 | BG653_00607 | Alpha-amylase precursor. | Arginine/agmatine antiporter. | 0.569 |
aml | malL_1 | BG653_03126 | BG653_01904 | Alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.721 |
aml | malL_2 | BG653_03126 | BG653_02216 | Alpha-amylase precursor. | Oligo-1,6-glucosidase. | 0.713 |
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