STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY47753.1Transglutaminase-activating metalloprotease precursor; Extracellular zinc metalloprotease. (543 aa)    
Predicted Functional Partners:
OSY47754.1
Transglutaminase-activating metalloprotease precursor.
 
  
 
0.971
OSY34875.1
Transglutaminase-activating metalloprotease precursor; Extracellular zinc metalloprotease.
  
  
 
0.908
lieA
Leupeptin-inactivating enzyme 1 precursor.
  
 0.833
OSY35021.1
Aminopeptidase S.
 
 0.709
OSY48150.1
Aminopeptidase S.
  
 0.702
ina
Immune inhibitor A precursor.
  
   
 0.638
OSY47758.1
Putative multidrug export ATP-binding/permease protein; Overlaps another CDS with the same product name.
       0.582
OSY47807.1
Hypothetical protein.
       0.576
snpA
Extracellular small neutral protease precursor; Belongs to the peptidase M7 family.
  
   
 0.563
xlyA
N-acetylmuramoyl-L-alanine amidase XlyA precursor.
   
  
 0.500
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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