Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY47437.1 | OSY47438.1 | BG653_01155 | BG653_01156 | Argininosuccinate lyase. | Hypothetical protein. | 0.765 |
OSY47437.1 | OSY47439.1 | BG653_01155 | BG653_01157 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.880 |
OSY47437.1 | mdtH_1 | BG653_01155 | BG653_01153 | Argininosuccinate lyase. | Multidrug resistance protein MdtH. | 0.893 |
OSY47437.1 | metC | BG653_01155 | BG653_01152 | Argininosuccinate lyase. | Cystathionine beta-lyase MetC. | 0.773 |
OSY47437.1 | sseA_1 | BG653_01155 | BG653_01154 | Argininosuccinate lyase. | 3-mercaptopyruvate sulfurtransferase. | 0.773 |
OSY47438.1 | OSY47437.1 | BG653_01156 | BG653_01155 | Hypothetical protein. | Argininosuccinate lyase. | 0.765 |
OSY47438.1 | OSY47439.1 | BG653_01156 | BG653_01157 | Hypothetical protein. | Argininosuccinate lyase. | 0.526 |
OSY47438.1 | mdtH_1 | BG653_01156 | BG653_01153 | Hypothetical protein. | Multidrug resistance protein MdtH. | 0.759 |
OSY47438.1 | metC | BG653_01156 | BG653_01152 | Hypothetical protein. | Cystathionine beta-lyase MetC. | 0.759 |
OSY47438.1 | sseA_1 | BG653_01156 | BG653_01154 | Hypothetical protein. | 3-mercaptopyruvate sulfurtransferase. | 0.761 |
OSY47439.1 | OSY47437.1 | BG653_01157 | BG653_01155 | Argininosuccinate lyase. | Argininosuccinate lyase. | 0.880 |
OSY47439.1 | OSY47438.1 | BG653_01157 | BG653_01156 | Argininosuccinate lyase. | Hypothetical protein. | 0.526 |
OSY47439.1 | mdtH_1 | BG653_01157 | BG653_01153 | Argininosuccinate lyase. | Multidrug resistance protein MdtH. | 0.812 |
OSY47439.1 | metC | BG653_01157 | BG653_01152 | Argininosuccinate lyase. | Cystathionine beta-lyase MetC. | 0.505 |
OSY47439.1 | sseA_1 | BG653_01157 | BG653_01154 | Argininosuccinate lyase. | 3-mercaptopyruvate sulfurtransferase. | 0.505 |
mdtH_1 | OSY47437.1 | BG653_01153 | BG653_01155 | Multidrug resistance protein MdtH. | Argininosuccinate lyase. | 0.893 |
mdtH_1 | OSY47438.1 | BG653_01153 | BG653_01156 | Multidrug resistance protein MdtH. | Hypothetical protein. | 0.759 |
mdtH_1 | OSY47439.1 | BG653_01153 | BG653_01157 | Multidrug resistance protein MdtH. | Argininosuccinate lyase. | 0.812 |
mdtH_1 | metC | BG653_01153 | BG653_01152 | Multidrug resistance protein MdtH. | Cystathionine beta-lyase MetC. | 0.773 |
mdtH_1 | sseA_1 | BG653_01153 | BG653_01154 | Multidrug resistance protein MdtH. | 3-mercaptopyruvate sulfurtransferase. | 0.773 |
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