Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OSY47157.1 | OSY47159.1 | BG653_01255 | BG653_01257 | Serine-protein kinase RsbW. | Hypothetical protein. | 0.582 |
| OSY47157.1 | OSY47161.1 | BG653_01255 | BG653_01259 | Serine-protein kinase RsbW. | Hypothetical protein. | 0.582 |
| OSY47157.1 | hppA | BG653_01255 | BG653_01256 | Serine-protein kinase RsbW. | K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. | 0.582 |
| OSY47157.1 | rsbV_3 | BG653_01255 | BG653_01254 | Serine-protein kinase RsbW. | Anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.997 |
| OSY47157.1 | rsmC | BG653_01255 | BG653_01258 | Serine-protein kinase RsbW. | Ribosomal RNA small subunit methyltransferase C; Belongs to the methyltransferase superfamily. | 0.582 |
| OSY47157.1 | srmB | BG653_01255 | BG653_01253 | Serine-protein kinase RsbW. | ATP-dependent RNA helicase SrmB. | 0.707 |
| OSY47159.1 | OSY47157.1 | BG653_01257 | BG653_01255 | Hypothetical protein. | Serine-protein kinase RsbW. | 0.582 |
| OSY47159.1 | OSY47161.1 | BG653_01257 | BG653_01259 | Hypothetical protein. | Hypothetical protein. | 0.710 |
| OSY47159.1 | hppA | BG653_01257 | BG653_01256 | Hypothetical protein. | K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. | 0.750 |
| OSY47159.1 | rsbV_3 | BG653_01257 | BG653_01254 | Hypothetical protein. | Anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.576 |
| OSY47159.1 | rsmC | BG653_01257 | BG653_01258 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase C; Belongs to the methyltransferase superfamily. | 0.772 |
| OSY47159.1 | srmB | BG653_01257 | BG653_01253 | Hypothetical protein. | ATP-dependent RNA helicase SrmB. | 0.582 |
| OSY47159.1 | topA | BG653_01257 | BG653_01263 | Hypothetical protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.582 |
| OSY47161.1 | OSY47157.1 | BG653_01259 | BG653_01255 | Hypothetical protein. | Serine-protein kinase RsbW. | 0.582 |
| OSY47161.1 | OSY47159.1 | BG653_01259 | BG653_01257 | Hypothetical protein. | Hypothetical protein. | 0.710 |
| OSY47161.1 | hppA | BG653_01259 | BG653_01256 | Hypothetical protein. | K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. | 0.664 |
| OSY47161.1 | rsbV_3 | BG653_01259 | BG653_01254 | Hypothetical protein. | Anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.438 |
| OSY47161.1 | rsmC | BG653_01259 | BG653_01258 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase C; Belongs to the methyltransferase superfamily. | 0.777 |
| OSY47161.1 | topA | BG653_01259 | BG653_01263 | Hypothetical protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.442 |
| fumB | hppA | BG653_05123 | BG653_01256 | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. | 0.485 |
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