Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY41150.1 | antA | BG653_05226 | BG653_01652 | Nuclear transport factor 2 (NTF2) domain protein. | Anthranilate 1,2-dioxygenase large subunit. | 0.974 |
OSY41150.1 | pobB | BG653_05226 | BG653_01500 | Nuclear transport factor 2 (NTF2) domain protein. | Phenoxybenzoate dioxygenase subunit beta. | 0.774 |
OSY48332.1 | antA | BG653_00209 | BG653_01652 | Hypothetical protein. | Anthranilate 1,2-dioxygenase large subunit. | 0.974 |
OSY48332.1 | pobB | BG653_00209 | BG653_01500 | Hypothetical protein. | Phenoxybenzoate dioxygenase subunit beta. | 0.774 |
andAa | antA | BG653_06432 | BG653_01652 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | Anthranilate 1,2-dioxygenase large subunit. | 0.859 |
andAa | hcaC_1 | BG653_06432 | BG653_01657 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit. | 0.958 |
andAa | mlr_1 | BG653_06432 | BG653_01654 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.943 |
andAa | pobB | BG653_06432 | BG653_01500 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | Phenoxybenzoate dioxygenase subunit beta. | 0.713 |
andAa | soxA | BG653_06432 | BG653_01653 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | Monomeric sarcosine oxidase. | 0.715 |
andAa | thcD_5 | BG653_06432 | BG653_05719 | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | Rhodocoxin reductase. | 0.913 |
antA | OSY41150.1 | BG653_01652 | BG653_05226 | Anthranilate 1,2-dioxygenase large subunit. | Nuclear transport factor 2 (NTF2) domain protein. | 0.974 |
antA | OSY48332.1 | BG653_01652 | BG653_00209 | Anthranilate 1,2-dioxygenase large subunit. | Hypothetical protein. | 0.974 |
antA | andAa | BG653_01652 | BG653_06432 | Anthranilate 1,2-dioxygenase large subunit. | Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. | 0.859 |
antA | fprA | BG653_01652 | BG653_00303 | Anthranilate 1,2-dioxygenase large subunit. | NADPH-ferredoxin reductase FprA. | 0.819 |
antA | hcaC_1 | BG653_01652 | BG653_01657 | Anthranilate 1,2-dioxygenase large subunit. | 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit. | 0.928 |
antA | mlr_1 | BG653_01652 | BG653_01654 | Anthranilate 1,2-dioxygenase large subunit. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.965 |
antA | ndoR_1 | BG653_01652 | BG653_02720 | Anthranilate 1,2-dioxygenase large subunit. | Ferredoxin--NAD(P)(+) reductase (naphthalene dioxygenase ferredoxin-specific). | 0.867 |
antA | pobB | BG653_01652 | BG653_01500 | Anthranilate 1,2-dioxygenase large subunit. | Phenoxybenzoate dioxygenase subunit beta. | 0.813 |
antA | soxA | BG653_01652 | BG653_01653 | Anthranilate 1,2-dioxygenase large subunit. | Monomeric sarcosine oxidase. | 0.924 |
antA | thcD_5 | BG653_01652 | BG653_05719 | Anthranilate 1,2-dioxygenase large subunit. | Rhodocoxin reductase. | 0.859 |
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