STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkC_2Serine/threonine-protein kinase PrkC. (498 aa)    
Predicted Functional Partners:
OSY46715.1
Hypothetical protein.
 
 
   0.876
pstP_3
PP2C-family Ser/Thr phosphatase.
 
  0.865
pstP_1
PP2C-family Ser/Thr phosphatase.
  0.834
pstP_2
PP2C-family Ser/Thr phosphatase.
 
  0.832
rcsC
Sensor histidine kinase RcsC.
  
 0.787
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.721
stp_18
Serine/threonine phosphatase stp.
  
  0.672
ptk
Tyrosine-protein kinase ptk.
    
   0.644
prkC_1
Serine/threonine-protein kinase PrkC.
  
     0.626
afsK_2
Serine/threonine-protein kinase AfsK.
  
     0.613
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.