STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdmFormaldehyde dismutase. (394 aa)    
Predicted Functional Partners:
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.828
manP
PTS system mannose-specific EIIBCA component.
  
 
 0.828
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.758
mlr_1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
 
 0.756
adhC2
NADP-dependent alcohol dehydrogenase C 2.
 
0.727
adh_1
Alcohol dehydrogenase.
 
0.709
ndoR_1
Ferredoxin--NAD(P)(+) reductase (naphthalene dioxygenase ferredoxin-specific).
   
 
 0.689
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
 
 0.616
paaE_1
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.616
ophA1
Phthalate dioxygenase reductase.
  
 
 0.616
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.