Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
araP_2 | araQ_1 | BG653_05766 | BG653_02213 | L-arabinose transport system permease protein AraP. | L-arabinose transport system permease protein AraQ. | 0.955 |
araP_2 | araQ_2 | BG653_05766 | BG653_05095 | L-arabinose transport system permease protein AraP. | L-arabinose transport system permease protein AraQ. | 0.955 |
araP_2 | araQ_3 | BG653_05766 | BG653_05535 | L-arabinose transport system permease protein AraP. | L-arabinose transport system permease protein AraQ. | 0.955 |
araP_2 | araQ_4 | BG653_05766 | BG653_05765 | L-arabinose transport system permease protein AraP. | L-arabinose transport system permease protein AraQ. | 0.994 |
araP_2 | msmE_1 | BG653_05766 | BG653_02215 | L-arabinose transport system permease protein AraP. | Multiple sugar-binding protein precursor. | 0.746 |
araP_2 | sugB_5 | BG653_05766 | BG653_06223 | L-arabinose transport system permease protein AraP. | Trehalose transport system permease protein SugB. | 0.954 |
araP_2 | sugC | BG653_05766 | BG653_05409 | L-arabinose transport system permease protein AraP. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.995 |
araQ_1 | araP_2 | BG653_02213 | BG653_05766 | L-arabinose transport system permease protein AraQ. | L-arabinose transport system permease protein AraP. | 0.955 |
araQ_1 | lacF_2 | BG653_02213 | BG653_02214 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.993 |
araQ_1 | lacF_3 | BG653_02213 | BG653_05096 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.971 |
araQ_1 | msmE_1 | BG653_02213 | BG653_02215 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.998 |
araQ_1 | sugC | BG653_02213 | BG653_05409 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.995 |
araQ_1 | ycjO_1 | BG653_02213 | BG653_00138 | L-arabinose transport system permease protein AraQ. | Inner membrane ABC transporter permease protein YcjO. | 0.930 |
araQ_2 | araP_2 | BG653_05095 | BG653_05766 | L-arabinose transport system permease protein AraQ. | L-arabinose transport system permease protein AraP. | 0.955 |
araQ_2 | lacF_2 | BG653_05095 | BG653_02214 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.970 |
araQ_2 | lacF_3 | BG653_05095 | BG653_05096 | L-arabinose transport system permease protein AraQ. | Lactose transport system permease protein LacF. | 0.979 |
araQ_2 | msmE_1 | BG653_05095 | BG653_02215 | L-arabinose transport system permease protein AraQ. | Multiple sugar-binding protein precursor. | 0.965 |
araQ_2 | sugC | BG653_05095 | BG653_05409 | L-arabinose transport system permease protein AraQ. | Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. | 0.995 |
araQ_2 | ycjO_1 | BG653_05095 | BG653_00138 | L-arabinose transport system permease protein AraQ. | Inner membrane ABC transporter permease protein YcjO. | 0.927 |
araQ_3 | araP_2 | BG653_05535 | BG653_05766 | L-arabinose transport system permease protein AraQ. | L-arabinose transport system permease protein AraP. | 0.955 |
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