Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY45380.1 | apxIB_1 | BG653_03131 | BG653_01695 | Putative ABC transporter ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.705 |
OSY45380.1 | apxIB_2 | BG653_03131 | BG653_01696 | Putative ABC transporter ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.708 |
OSY45380.1 | cydD | BG653_03131 | BG653_02739 | Putative ABC transporter ATP-binding protein. | ATP-binding/permease protein CydD. | 0.656 |
OSY45380.1 | eryA_4 | BG653_03131 | BG653_01551 | Putative ABC transporter ATP-binding protein. | Erythronolide synthase, modules 3 and 4. | 0.613 |
OSY45380.1 | lagD_1 | BG653_03131 | BG653_03701 | Putative ABC transporter ATP-binding protein. | Lactococcin-G-processing and transport ATP-binding protein LagD. | 0.739 |
OSY45380.1 | lagD_2 | BG653_03131 | BG653_06917 | Putative ABC transporter ATP-binding protein. | Lactococcin-G-processing and transport ATP-binding protein LagD. | 0.730 |
OSY45380.1 | lgrB_1 | BG653_03131 | BG653_04961 | Putative ABC transporter ATP-binding protein. | Linear gramicidin synthase subunit B; Overlaps another CDS with the same product name. | 0.729 |
OSY45380.1 | lgrD_1 | BG653_03131 | BG653_01051 | Putative ABC transporter ATP-binding protein. | Linear gramicidin synthase subunit D. | 0.674 |
OSY45380.1 | lmrA | BG653_03131 | BG653_03130 | Putative ABC transporter ATP-binding protein. | Multidrug resistance ABC transporter ATP-binding and permease protein. | 0.856 |
OSY45380.1 | pks2_2 | BG653_03131 | BG653_05920 | Putative ABC transporter ATP-binding protein. | Phthioceranic/hydroxyphthioceranic acid synthase. | 0.779 |
apxIB_1 | OSY45380.1 | BG653_01695 | BG653_03131 | Toxin RTX-I translocation ATP-binding protein. | Putative ABC transporter ATP-binding protein. | 0.705 |
apxIB_1 | apxIB_2 | BG653_01695 | BG653_01696 | Toxin RTX-I translocation ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.861 |
apxIB_1 | lagD_2 | BG653_01695 | BG653_06917 | Toxin RTX-I translocation ATP-binding protein. | Lactococcin-G-processing and transport ATP-binding protein LagD. | 0.400 |
apxIB_1 | lmrA | BG653_01695 | BG653_03130 | Toxin RTX-I translocation ATP-binding protein. | Multidrug resistance ABC transporter ATP-binding and permease protein. | 0.686 |
apxIB_2 | OSY45380.1 | BG653_01696 | BG653_03131 | Toxin RTX-I translocation ATP-binding protein. | Putative ABC transporter ATP-binding protein. | 0.708 |
apxIB_2 | apxIB_1 | BG653_01696 | BG653_01695 | Toxin RTX-I translocation ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.861 |
apxIB_2 | lmrA | BG653_01696 | BG653_03130 | Toxin RTX-I translocation ATP-binding protein. | Multidrug resistance ABC transporter ATP-binding and permease protein. | 0.701 |
cydD | OSY45380.1 | BG653_02739 | BG653_03131 | ATP-binding/permease protein CydD. | Putative ABC transporter ATP-binding protein. | 0.656 |
cydD | lmrA | BG653_02739 | BG653_03130 | ATP-binding/permease protein CydD. | Multidrug resistance ABC transporter ATP-binding and permease protein. | 0.656 |
eryA_4 | OSY45380.1 | BG653_01551 | BG653_03131 | Erythronolide synthase, modules 3 and 4. | Putative ABC transporter ATP-binding protein. | 0.613 |
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