Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY40251.1 | OSY45082.1 | BG653_05533 | BG653_03487 | Helix-turn-helix domain protein. | CGNR zinc finger. | 0.478 |
OSY40875.1 | OSY45082.1 | BG653_05277 | BG653_03487 | Helix-turn-helix domain protein. | CGNR zinc finger. | 0.474 |
OSY45081.1 | OSY45082.1 | BG653_03486 | BG653_03487 | Major Facilitator Superfamily protein. | CGNR zinc finger. | 0.871 |
OSY45082.1 | OSY40251.1 | BG653_03487 | BG653_05533 | CGNR zinc finger. | Helix-turn-helix domain protein. | 0.478 |
OSY45082.1 | OSY40875.1 | BG653_03487 | BG653_05277 | CGNR zinc finger. | Helix-turn-helix domain protein. | 0.474 |
OSY45082.1 | OSY45081.1 | BG653_03487 | BG653_03486 | CGNR zinc finger. | Major Facilitator Superfamily protein. | 0.871 |
OSY45082.1 | OSY46463.1 | BG653_03487 | BG653_02135 | CGNR zinc finger. | Helix-turn-helix domain protein. | 0.488 |
OSY45082.1 | OSY47718.1 | BG653_03487 | BG653_00974 | CGNR zinc finger. | Helix-turn-helix domain protein. | 0.569 |
OSY45082.1 | rhtA_3 | BG653_03487 | BG653_05880 | CGNR zinc finger. | Threonine/homoserine exporter RhtA. | 0.578 |
OSY46463.1 | OSY45082.1 | BG653_02135 | BG653_03487 | Helix-turn-helix domain protein. | CGNR zinc finger. | 0.488 |
OSY47718.1 | OSY45082.1 | BG653_00974 | BG653_03487 | Helix-turn-helix domain protein. | CGNR zinc finger. | 0.569 |
rhtA_3 | OSY45082.1 | BG653_05880 | BG653_03487 | Threonine/homoserine exporter RhtA. | CGNR zinc finger. | 0.578 |