Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
afsK_5 | pknB_2 | BG653_03581 | BG653_01786 | Serine/threonine-protein kinase AfsK. | Serine/threonine-protein kinase PknB. | 0.590 |
afsK_5 | pknB_3 | BG653_03581 | BG653_01822 | Serine/threonine-protein kinase AfsK. | Serine/threonine-protein kinase PknB. | 0.585 |
afsK_5 | pknB_6 | BG653_03581 | BG653_03769 | Serine/threonine-protein kinase AfsK. | Serine/threonine-protein kinase PknB. | 0.403 |
afsK_5 | pknB_8 | BG653_03581 | BG653_04752 | Serine/threonine-protein kinase AfsK. | Serine/threonine-protein kinase PknB. | 0.586 |
afsK_5 | pstP_2 | BG653_03581 | BG653_03760 | Serine/threonine-protein kinase AfsK. | PP2C-family Ser/Thr phosphatase. | 0.852 |
afsK_5 | spk1_2 | BG653_03581 | BG653_05723 | Serine/threonine-protein kinase AfsK. | Serine/threonine-protein kinase PK-1. | 0.591 |
pknB_2 | afsK_5 | BG653_01786 | BG653_03581 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase AfsK. | 0.590 |
pknB_2 | pknB_3 | BG653_01786 | BG653_01822 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.465 |
pknB_2 | pknB_4 | BG653_01786 | BG653_01823 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.425 |
pknB_2 | pknB_6 | BG653_01786 | BG653_03769 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.469 |
pknB_2 | pknB_8 | BG653_01786 | BG653_04752 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.464 |
pknB_2 | prkC_3 | BG653_01786 | BG653_03762 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PrkC. | 0.573 |
pknB_2 | prkC_6 | BG653_01786 | BG653_05337 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PrkC. | 0.585 |
pknB_2 | pstP_2 | BG653_01786 | BG653_03760 | Serine/threonine-protein kinase PknB. | PP2C-family Ser/Thr phosphatase. | 0.974 |
pknB_2 | spk1_2 | BG653_01786 | BG653_05723 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PK-1. | 0.496 |
pknB_3 | afsK_5 | BG653_01822 | BG653_03581 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase AfsK. | 0.585 |
pknB_3 | pknB_2 | BG653_01822 | BG653_01786 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.465 |
pknB_3 | pknB_4 | BG653_01822 | BG653_01823 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.656 |
pknB_3 | pknB_6 | BG653_01822 | BG653_03769 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PknB. | 0.486 |
pknB_3 | prkC_3 | BG653_01822 | BG653_03762 | Serine/threonine-protein kinase PknB. | Serine/threonine-protein kinase PrkC. | 0.571 |
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