STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY43385.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
OSY43384.1
Hypothetical protein.
 
     0.792
acuR_1
Transcriptional regulator AcuR.
       0.740
stp_12
Multidrug resistance protein stp; Belongs to the major facilitator superfamily.
       0.696
OSY43381.1
Acyltransferase family protein.
 
     0.645
OSY43388.1
Hypothetical protein.
       0.582
cpxA
Sensor protein CpxA.
  
     0.555
OSY44266.1
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.548
OSY44489.1
Hypothetical protein.
  
     0.483
fas2_2
Ferredoxin fas2.
  
     0.433
OSY45747.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.