STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagF_3CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase. (814 aa)    
Predicted Functional Partners:
tagH_1
Teichoic acids export ATP-binding protein TagH.
 
 
 0.889
tagH_2
Teichoic acids export ATP-binding protein TagH.
 
 
 0.888
epsL_2
Putative sugar transferase EpsL.
 
  
 0.840
tagG_1
Teichoic acid translocation permease protein TagG.
 
  
 0.830
tagG_2
Teichoic acid translocation permease protein TagG.
 
  
 0.827
spsI_2
Bifunctional IPC transferase and DIPP synthase; Overlaps another CDS with the same product name.
 
  
 0.791
lgrB_1
Linear gramicidin synthase subunit B; Overlaps another CDS with the same product name.
  
 0.784
ptk
Tyrosine-protein kinase ptk.
 
  
 0.700
hddC_1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.695
pgaC_3
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
 
0.678
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
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