STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY39956.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.877
OSY41687.1
Translocation protein TolB.
   
 0.872
OSY39948.1
Ankyrin repeat protein.
  
 0.851
OSY37345.1
Ankyrin repeats (3 copies).
   
 0.846
OSY48461.1
Caspase domain protein.
  
 0.805
pknB_5
Serine/threonine-protein kinase PknB.
   
 0.798
OSY44510.1
SMP-30/Gluconolaconase/LRE-like region.
   
 0.779
OSY43831.1
WD domain, G-beta repeat.
   
 0.779
OSY41965.1
Hypothetical protein.
   
 0.779
OSY40299.1
Hypothetical protein.
   
 0.779
Your Current Organism:
Streptomyces platensis
NCBI taxonomy Id: 58346
Other names: ATCC 13865, ATCC 23948, BCRC 11898, CBS 310.56, CBS 932.68, CCRC 11898, CCRC:11898, CCUG 11118, DSM 40041, IFO 12901, ISP 5041, JCM 4189, JCM 4662, NBRC 12901, NCAIM B.01481, NCIMB 9607, NRRL 2364, NRRL B-5486, NRRL-ISP 5041, S. platensis, Streptomyces sp. CB00739
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.