Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY39544.1 | OSY42992.1 | BG653_05728 | BG653_04589 | BFD-like [2Fe-2S] binding domain protein. | Hypothetical protein. | 0.712 |
OSY39544.1 | camA_1 | BG653_05728 | BG653_02080 | BFD-like [2Fe-2S] binding domain protein. | Putidaredoxin reductase. | 0.806 |
OSY39544.1 | camA_2 | BG653_05728 | BG653_05021 | BFD-like [2Fe-2S] binding domain protein. | Putidaredoxin reductase. | 0.806 |
OSY39544.1 | cysG | BG653_05728 | BG653_04286 | BFD-like [2Fe-2S] binding domain protein. | Siroheme synthase. | 0.797 |
OSY39544.1 | korA | BG653_05728 | BG653_02553 | BFD-like [2Fe-2S] binding domain protein. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.941 |
OSY39544.1 | narB_2 | BG653_05728 | BG653_02081 | BFD-like [2Fe-2S] binding domain protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.966 |
OSY39544.1 | nasD | BG653_05728 | BG653_06411 | BFD-like [2Fe-2S] binding domain protein. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.806 |
OSY39544.1 | petC_1 | BG653_05728 | BG653_05914 | BFD-like [2Fe-2S] binding domain protein. | Cytochrome b6-f complex iron-sulfur subunit. | 0.758 |
OSY39544.1 | thcD_1 | BG653_05728 | BG653_01658 | BFD-like [2Fe-2S] binding domain protein. | Rhodocoxin reductase. | 0.806 |
OSY39544.1 | thcD_4 | BG653_05728 | BG653_05400 | BFD-like [2Fe-2S] binding domain protein. | Rhodocoxin reductase. | 0.806 |
OSY42992.1 | OSY39544.1 | BG653_04589 | BG653_05728 | Hypothetical protein. | BFD-like [2Fe-2S] binding domain protein. | 0.712 |
OSY42992.1 | camA_1 | BG653_04589 | BG653_02080 | Hypothetical protein. | Putidaredoxin reductase. | 0.590 |
OSY42992.1 | camA_2 | BG653_04589 | BG653_05021 | Hypothetical protein. | Putidaredoxin reductase. | 0.590 |
OSY42992.1 | korA | BG653_04589 | BG653_02553 | Hypothetical protein. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.785 |
OSY42992.1 | narB_2 | BG653_04589 | BG653_02081 | Hypothetical protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.722 |
OSY42992.1 | nasD | BG653_04589 | BG653_06411 | Hypothetical protein. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.573 |
OSY42992.1 | petC_1 | BG653_04589 | BG653_05914 | Hypothetical protein. | Cytochrome b6-f complex iron-sulfur subunit. | 0.771 |
OSY42992.1 | thcD_1 | BG653_04589 | BG653_01658 | Hypothetical protein. | Rhodocoxin reductase. | 0.627 |
OSY42992.1 | thcD_4 | BG653_04589 | BG653_05400 | Hypothetical protein. | Rhodocoxin reductase. | 0.627 |
camA_1 | OSY39544.1 | BG653_02080 | BG653_05728 | Putidaredoxin reductase. | BFD-like [2Fe-2S] binding domain protein. | 0.806 |
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