STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND11325.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (571 aa)    
Predicted Functional Partners:
AND11326.1
Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AND14906.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.677
AND11341.1
Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
AND15033.1
Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
AND13112.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
MrpI
DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
AND11324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.484
AND11351.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges t [...]
 
 
 
0.438
AND12211.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
   
 0.409
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.