STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atfBType 1 fimbrial chaperone protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
AND11667.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.947
AND11780.1
Usher protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
AND12865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.854
AND13140.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
AND13147.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
htrE_1
F17 fimbrial usher; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
fimD_5
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
AND14643.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
AND14892.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.854
papC_7
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.853
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.