STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND13216.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)    
Predicted Functional Partners:
AND13215.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.985
AND13217.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
kdsA
3-deoxy-8-phosphooctulonate synthase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.
       0.561
rimI
Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
   
   0.524
yjaB
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
ypeA
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
AND13116.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
AND13463.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
AND13687.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
AND14187.1
Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.524
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.