STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOUC001_14685Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
tssI
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.668
cca
2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
     
 0.643
tssB
Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.641
ansA
L-asparaginase 1; Converts asparagine to aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.640
AND12338.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.630
traD
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.540
idrC_1
Type IV secretion protein Rhs; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.454
slp
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.448
tssB-2
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.422
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.