STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND14325.1RTX toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (2776 aa)    
Predicted Functional Partners:
zapA-2
Serine 3-dehydrogenase; One of the virulence factors produced during swarmer cell differentiation of the bacteria, which seems to be associated with pathogenesis. The protease activity is limited to IgA1, IgA2, as well as IgG degradation.
  
   
 0.821
hlyD
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.818
AND14078.1
Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
AND12193.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.711
AND14081.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.709
AND12191.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.706
AND14080.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.612
AND11902.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.586
AND14065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.563
zapC_2
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.