STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybfAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)    
Predicted Functional Partners:
ybgA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.864
ybeA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.858
aadA1
ANT(3'') family aminoglycoside nucleotidyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
     
 0.682
sat2
Streptothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.635
dfrA1
Trimethoprim-resistant dihydrofolate reductase DfrA1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dihydrofolate reductase family.
     
 0.507
eamB
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.447
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.