STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND14959.1Competence protein E; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (371 aa)    
Predicted Functional Partners:
AND14961.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.983
AND14962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
AND12172.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.932
AND12173.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.929
AND13963.1
Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.812
AND14960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
mrcA
Bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.667
AND13958.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase A24 family.
 
  
 0.658
tolR
Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.
  
     0.535
ppdD
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.530
Your Current Organism:
Proteus mirabilis
NCBI taxonomy Id: 584
Other names: ATCC 29906, CCUG 26767, CIP 103181, DSM 4479, LMG 3257, LMG:3257, NCTC 11938, P. mirabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.