STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0017COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: tau:Tola_1688 dehydratase small subunit; PFAM: dehydratase small subunit; SPTR: C1TM34 Propanediol dehydratase, small subunit; PFAM: Dehydratase small subunit. (178 aa)    
Predicted Functional Partners:
Apau_0015
COGs: COG4909 Propanediol dehydratase large subunit; InterPro IPR003206:IPR016176; KEGG: tex:Teth514_1953 glycerol dehydratase; PFAM: dehydratase large subunit; PRIAM: Glycerol dehydratase; SPTR: C1TM36 Propanediol dehydratase, large subunit; PFAM: Dehydratase large subunit.
 
 0.999
Apau_0016
Dehydratase medium subunit; InterPro IPR003208:IPR010254; KEGG: dal:Dalk_4998 dehydratase medium subunit; PFAM: dehydratase medium subunit; SPTR: C1TM35 Dehydratase medium subunit; PFAM: Dehydratase medium subunit.
 
 0.999
Apau_0019
Hypothetical protein; InterPro IPR010254; KEGG: yen:YE2734 putative propanediol utilization protein: diol dehydratase reactivation; SPTR: C1TM32 Putative uncharacterized protein.
  
  
 0.971
Apau_0018
Glycerol dehydratase reactivation factor, large subunit; InterPro IPR009191; KEGG: tex:Teth514_1950 hypothetical protein; PFAM: Diol/glycerol dehydratase reactivating factor large subunit; SPTR: C1TM33 Diol dehydratase / glycerol dehydratase reactivase large subunit; PFAM: Diol dehydratase reactivase ATPase-like domain.
 
  
 0.966
Apau_0014
COGs: COG4816 Ethanolamine utilization protein; InterPro IPR000249:IPR009193; KEGG: tex:Teth514_1954 microcompartments protein; PFAM: microcompartments protein; SPTR: C1TM37 Ethanolamine utilization protein; PFAM: BMC domain.
 
  
 0.960
Apau_0027
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016161:IPR012408:IPR016162; KEGG: rru:Rru_A0914 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1TM21 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family.
 
 
 0.945
Apau_0026
ATP/cobalamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779:IPR005624:IPR016030; KEGG: tex:Teth514_1943 ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; protein of unknown function DUF336; SPTR: C1TM22 ATP:cob(I)alamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Domain of unknown function (DUF336); Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase.
 
   
 0.896
Apau_0022
COGs: COG4820 Ethanolamine utilization protein possible chaperonin; InterPro IPR013366:IPR018181; KEGG: dsa:Desal_0474 ethanolamine utilization protein EutJ family protein; SPTR: C6BX61 Ethanolamine utilization protein EutJ family protein; TIGRFAM: ethanolamine utilization protein EutJ family protein; PFAM: MreB/Mbl protein; TIGRFAM: ethanolamine utilization protein EutJ family protein.
 
    0.828
Apau_0020
Microcompartments protein; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: rru:Rru_A0907 microcompartments protein; PFAM: microcompartments protein; SPTR: C1TM31 Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
  
  
 0.805
Apau_0012
Ethanolamine/propanediol utilization protein, EutP/PduV; COGs: COG4917 Ethanolamine utilization protein; InterPro IPR019611:IPR012381; KEGG: tai:Taci_0086 ethanolamine utilization protein-like protein; PFAM: Ethanolamine/propanediol utilisation protein, EutP/PduV -like; SPTR: D1B7S3 Ethanolamine utilization protein-like protein; PFAM: Ethanolamine utilisation - propanediol utilisation; Belongs to the EutP/PduV family.
 
   
 0.705
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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