STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0031COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR012338; KEGG: sfu:Sfum_0674 beta-lactamase; PFAM: beta-lactamase; SPTR: A0LG21 Beta-lactamase; PFAM: Beta-lactamase. (712 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.699
Apau_0032
HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834:IPR005833; KEGG: ttr:Tter_0876 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: D1CFT7 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily I [...]
       0.664
Apau_0329
Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR002410:IPR000073; KEGG: mno:Mnod_0825 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: B8IGF4 Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold.
 
  
 0.564
Apau_0030
Ste24 endopeptidase; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: lch:Lcho_0984 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; PRIAM: Ste24 endopeptidase; SPTR: C7HYF4 Ste24 endopeptidase; PFAM: Peptidase family M48.
     
 0.537
Apau_2384
InterPro IPR016181:IPR000182; KEGG: swo:Swol_1997 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q0AVG2 Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: Acetyltransferase (GNAT) family.
  
     0.528
Apau_0033
KEGG: tai:Taci_0015 hypothetical protein; SPTR: D1B7K3 Putative uncharacterized protein.
       0.491
Apau_2299
InterPro IPR016181:IPR000182:IPR003594; KEGG: mpl:Mpal_1924 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: C1TLX8 Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.490
Apau_0056
Anti-sigma-factor antagonist; InterPro IPR002645; KEGG: sfu:Sfum_1506 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: C1ZM00 Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.467
Apau_0034
KEGG: tai:Taci_0015 hypothetical protein; SPTR: D1B7K3 Putative uncharacterized protein.
       0.432
Apau_0035
KEGG: dra:DR_1069 hypothetical protein; SPTR: Q9RVG0 Putative uncharacterized protein.
       0.420
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.