STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0152COGs: COG3366 conserved hypothetical protein; KEGG: tai:Taci_0047 hypothetical protein; SPTR: D1B7N4 Putative uncharacterized protein. (304 aa)    
Predicted Functional Partners:
Apau_1281
Abortive infection protein; InterPro IPR003675; KEGG: mxa:MXAN_2755 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: C1TQR4 Predicted metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
    0.913
Apau_0153
COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878:IPR012382:IPR014777; KEGG: tai:Taci_0048 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C1TM51 Precorrin-2 methylase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
     0.856
Apau_0148
COGs: COG0007 Uroporphyrinogen-III methylase; InterProIPR006366:IPR000878:IPR003754:IPR014777:IPR 014776; KEGG: tai:Taci_0043 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: D1B7N0 Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
 
     0.842
Apau_0151
COGs: COG0373 Glutamyl-tRNA reductase; InterPro IPR015895:IPR016040; KEGG: tai:Taci_0046 tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like protein; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; PRIAM: Glutamyl-tRNA reductase; SPTR: C1TM52 Glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase.
 
     0.821
Apau_0149
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
       0.779
Apau_0318
InterPro IPR000620; KEGG: tai:Taci_0183 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: D1B820 Putative uncharacterized protein; PFAM: EamA-like transporter family.
  
    0.771
Apau_0145
Porphobilinogen synthase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731:IPR013785; KEGG: tai:Taci_0041 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: D1B7M8 Porphobilinogen synthase; PFAM: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.770
Apau_0150
COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR016040; KEGG: tai:Taci_0045 siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)-like protein; SPTR: D1B7N2 Siroheme synthase (Precorrin-2 oxidase/ferrochelatase domain)-like protein; TIGRFAM: siroheme synthase, N-terminal domain.
       0.770
hemL
COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR004639:IPR005814:IPR015424:IPR015421; KEGG: tai:Taci_0042 glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: C1TM55 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.
       0.769
Apau_0146
KEGG: bfs:BF1981 hypothetical protein; SPTR: C3RPU8 Putative uncharacterized protein.
       0.768
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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