STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0231Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: slo:Shew_2209 peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: C1TQ83 Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family. (504 aa)    
Predicted Functional Partners:
Apau_0062
Conserved hypothetical protein; InterPro IPR011110:IPR011043; KEGG: rrs:RoseRS_2786 hypothetical protein; SPTR: A5UX04 Putative uncharacterized protein.
 
 0.964
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.848
Apau_0140
Polymorphic membrane protein Chlamydia; InterPro IPR003368:IPR011050; KEGG: gsu:GSU0754 fibronectin type III domain-containing protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: Q74F55 Fibronectin type III domain protein; PFAM: Protein of unknown function (DUF1565).
 
 
 0.725
Apau_2309
Polymorphic outer membrane protein; InterPro IPR011050:IPR003368:IPR006626; KEGG: sti:Sthe_0586 polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: D1C1A7 Polymorphic outer membrane protein; TIGRFAM: polymorphic outer membrane protein.
 
 
 0.706
Apau_0169
Polymorphic outer membrane protein; InterPro IPR003368:IPR011050; KEGG: gsu:GSU0754 fibronectin type III domain-containing protein; PFAM: Polymorphic membrane protein Chlamydia; SPTR: B5JIM9 Putative uncharacterized protein; TIGRFAM: polymorphic outer membrane protein; TIGRFAM: Chlamydial polymorphic outer membrane protein repeat.
 
 
 0.701
Apau_1452
Cell division FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: tai:Taci_0907 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: D1BA37 Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
  
 
 0.695
Apau_0230
KEGG: hypothetical protein; SPTR: C1TQ82 Putative uncharacterized protein.
       0.572
Apau_0379
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR004358:IPR003018:IPR000014:IPR 003661:IPR003594:IPR009082:IPR011006:IPR013656; KEGG: chl:Chy400_0428 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; SPTR: B9LID2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain; Histidine kina [...]
 
  
 0.568
Apau_2300
ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR018303:IPR001757:IPR000695:IPR004014:IPR 008250:IPR005834:IPR006068; KEGG: pth:PTH_1801 cation transport ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Calcium-transporting ATPase; SPTR: A5D194 Cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase [...]
   
 
 0.564
Apau_1354
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.509
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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