STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Apau_0239Ferredoxin-like protein; InterPro IPR012336:IPR012335; KEGG: nth:Nther_0098 ferredoxin-like protein; SPTR: C1TS11 Ferredoxin. (123 aa)    
Predicted Functional Partners:
Apau_0248
NAD(P)-dependent iron-only hydrogenase catalytic subunit; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR013352:IPR001041:IPR019574:IPR001450:IPR 004108:IPR003149:IPR017900:IPR009016:IPR017896; KEGG: tai:Taci_0150 hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; SPTR: D1B7Y7 Hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-t [...]
  
 0.968
Apau_0240
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR009737:IPR011538:IPR019554:IPR019575:IPR 001450:IPR017900:IPR001949:IPR012336:IPR017896:IPR012335; KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: C1TS [...]
 
  
0.965
Apau_0238
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: dae:Dtox_3506 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: C1TS10 NADH dehydrogenase subunit E; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
 
 
 0.932
Apau_1103
Fe-S cluster domain protein; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR001450:IPR007202:IPR009016:IPR017900:IPR 017896; KEGG: tai:Taci_0692 Fe-S cluster domain protein; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: D1B9H5 Fe-S cluster domain protein; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster.
 
 
 0.923
Apau_0241
NAD-dependent formate dehydrogenase catalytic subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; Contains selenocysteine; InterProIPR006478:IPR001041:IPR019574:IPR001450:IPR 006963:IPR006656:IPR006657:IPR017900:IPR006655:IPR000283:I PR009010:IPR017896; KEGG: chy:CHY_0733 NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinuc [...]
  
 0.903
Apau_0247
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR011538:IPR019554:IPR019575:IPR001450:IPR 017900:IPR001949:IPR012336:IPR017896:IPR012335; KEGG: tai:Taci_0149 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: D1B7Y6 NADH dehydrogenase (Quinone [...]
 
  
0.881
Apau_0526
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896:IPR012335:IPR017900:IPR001949:IPR 012336:IPR011538:IPR019554:IPR019575:IPR001450; KEGG: tai:Taci_0471 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: NADH dehydrogenase (quinone); SPTR: D1B8V4 NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F ir [...]
 
  
0.798
Apau_2307
Fe-S cluster domain protein; COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR009016:IPR017900:IPR017896:IPR001450:IPR 004108:IPR007202; KEGG: pca:Pcar_1833 ferredoxin 2; PFAM: Fe-S cluster domain protein; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C1TNZ9 Iron only hydrogenase large subunit; PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster.
 
 
 0.792
Apau_1105
PHP domain protein; InterPro IPR004013:IPR016195:IPR003141; KEGG: tai:Taci_0694 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: D1B9H7 PHP domain protein; PFAM: PHP domain.
 
     0.775
Apau_1101
HPr kinase; KEGG: tai:Taci_0690 hypothetical protein; SPTR: D1B9H3 Putative uncharacterized protein; PFAM: DRTGG domain.
 
     0.773
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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