STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0297Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tai:Taci_0805 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: C1TP01 Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region. (383 aa)    
Predicted Functional Partners:
Apau_1027
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tai:Taci_0636 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9B9 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.924
Apau_1028
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tai:Taci_0637 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9C0 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.924
Apau_2284
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tai:Taci_0685 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9G8 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.916
Apau_1096
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tai:Taci_0685 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9G8 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.914
Apau_1097
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tai:Taci_0686 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9G9 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.903
Apau_2285
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tai:Taci_0686 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B9G9 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.901
Apau_0763
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tai:Taci_1427 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B6L6 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.900
Apau_0762
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tai:Taci_1428 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B6L7 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.892
Apau_1029
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tai:Taci_0638 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D1B9C1 ABC transporter related protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.890
Apau_1438
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tai:Taci_1396 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: D1B6I6 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.885
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.