STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0372KEGG: tai:Taci_0135 TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C1TQ21 TRAP-type C4-dicarboxylate transport system, large permease component. (429 aa)    
Predicted Functional Partners:
Apau_0371
KEGG: tai:Taci_0136 hypothetical protein; SPTR: C1TQ22 Putative uncharacterized protein.
       0.810
Apau_0370
InterPro IPR007036; KEGG: tai:Taci_0137 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: C9M6B3 Succinylglutamate desuccinylase/aspartoacylase family protein; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
       0.781
Apau_0373
KEGG: tle:Tlet_1160 hypothetical protein; SPTR: C1TQ20 Putative uncharacterized protein.
       0.555
Apau_0369
COGs: COG4690 Dipeptidase; InterPro IPR005322; KEGG: sun:SUN_0886 dipeptidase; PFAM: peptidase U34 dipeptidase; SPTR: C1TQ19 Dipeptidase; PFAM: Peptidase family C69.
       0.466
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.