STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Apau_0477CheW protein; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: gbm:Gbem_2031 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: B5ECK9 CheW protein; PFAM: CheW-like domain. (136 aa)    
Predicted Functional Partners:
Apau_0473
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR005467:IPR001789:IPR002545:IPR008207:IPR 004358:IPR003594:IPR011006; KEGG: gme:Gmet_2710 CheA signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: C1TR21 Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; Response reg [...]
 
 0.999
Apau_0379
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR004358:IPR003018:IPR000014:IPR 003661:IPR003594:IPR009082:IPR011006:IPR013656; KEGG: chl:Chy400_0428 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; PRIAM: Histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; SPTR: B9LID2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain; Histidine kina [...]
  
 0.976
Apau_2164
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR008207:IPR 005467:IPR001789:IPR000014:IPR004358:IPR003661:IPR013656; KEGG: dma:DMR_28640 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: C4XHI1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: [...]
  
 0.971
Apau_0708
PAS/PAC sensor hybrid histidine kinase; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 004358:IPR001610:IPR003661:IPR003594:IPR011006:IPR009082:I PR013656; KEGG: dol:Dole_3272 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing [...]
  
 0.963
Apau_0733
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 008207:IPR004358:IPR001610:IPR003661:IPR003594:IPR011006:I PR009082:IPR013655:IPR013767:IPR013656; KEGG: tai:Taci_1451 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC rep [...]
  
 0.963
Apau_0873
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR005467:IPR002545:IPR008207:IPR004358:IPR 003594:IPR009082:IPR010808:IPR004105; KEGG: tai:Taci_1310 CheA signal transduction histidine kinase; PFAM: Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SPTR: D1B6A0 CheA signal transduction histidine kina [...]
 
 0.962
Apau_0476
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR019734:IPR000780:IPR013026:IPR011990; KEGG: pol:Bpro_2459 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: C1TR27 Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain.
 
 
 0.958
Apau_0861
COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR012826:IPR001172:IPR001543; KEGG: tai:Taci_1322 flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; SPTR: D1B6B2 Flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; flagellar motor switch protein FliN.
  
 
 0.958
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.948
Apau_1725
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR005467:IPR001789:IPR000014:IPR 000700:IPR013767:IPR003661:IPR003594:IPR001610:IPR011006:I PR009082; KEGG: dol:Dole_3272 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; response regulator receiver; SP [...]
  
 0.946
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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