STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_0486L-2-aminoadipate N-acetyltransferase; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterProIPR011761:IPR016185:IPR004666:IPR011870:IPR 013651; KEGG: tai:Taci_0444 lysine biosynthesis enzyme LysX; PFAM: RimK domain protein ATP-grasp; SPTR: D1B8S7 Lysine biosynthesis enzyme LysX; TIGRFAM: lysine biosynthesis enzyme LysX; alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: Lysine biosynthesis enzyme LysX; alpha-L-glutamate ligases, RimK family; Belongs to the RimK family. (283 aa)    
Predicted Functional Partners:
Apau_0490
COGs: COG0548 Acetylglutamate kinase; InterPro IPR001057:IPR001048:IPR011148; KEGG: tai:Taci_0449 aspartate/glutamate/uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: D1B8T2 Aspartate/glutamate/uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase.
 
  
 0.981
Apau_0492
COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261:IPR010175:IPR002933; KEGG: tai:Taci_0451 N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: peptidase M20; SPTR: D1B8T4 N-acetyl-ornithine/N-acetyl-lysine deacetylase; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase.
 
  
 0.922
Apau_0485
KEGG: tai:Taci_0443 hypothetical protein; SPTR: D1B8S6 Putative uncharacterized protein; TIGRFAM: lysine biosynthesis protein LysW.
     
 0.840
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.772
Apau_0488
COGs: COG0372 Citrate synthase; InterPro IPR016142:IPR016141:IPR002020; KEGG: tai:Taci_0447 citrate synthase-like protein; PFAM: Citrate synthase; SPTR: D1B8T0 Citrate synthase-like protein; PFAM: Citrate synthase.
    
 0.704
Apau_0044
NADH:flavin oxidoreductase/NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155:IPR013785; KEGG: cdl:CDR20291_2962 predicted enoate reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: C6PZ44 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family.
    
 0.635
Apau_1566
Glutaredoxin; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR002109:IPR012335:IPR012336:IPR011767; KEGG: tai:Taci_0792 glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; SPTR: D1B9S2 Glutaredoxin-like protein, YruB-family; PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB-family.
    
 0.586
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.578
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
    
 0.569
Apau_0207
COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: tai:Taci_0138 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: D1B7X5 Gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase.
    
 0.557
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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